read-cache: use freshen_shared_index() in read_index_from()

read-cache: use freshen_shared_index() in read_index_from()

This way a share index file will not be garbage collected if
we still read from an index it is based from.

As we need to read the current index before creating a new
one, the tests have to be adjusted, so that we don't expect
an old shared index file to be deleted right away when we
create a new one.

Signed-off-by: Christian Couder <redacted>
Signed-off-by: Junio C Hamano <redacted>